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MT1C metallothionein 1C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837274, updated on 18-Sep-2024

Summary

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Official Symbol
MT1C
Official Full Name
metallothionein 1C
Primary source
TAIR:AT1G07610
Locus tag
AT1G07610
See related
Araport:AT1G07610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22G5.40; metallothionein 1C
Summary
one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance.
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Genomic context

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See MT1C in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (2341447..2342148)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene metallothionein 1A Neighboring gene ncRNA Neighboring gene GTP-binding protein Obg/CgtA Neighboring gene GTP-binding protein Obg/CgtA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure, organization and expression of the metallothionein gene family in Arabidopsis. Zhou J, et al. Mol Gen Genet, 1995 Aug 21. PMID 7565594
  2. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_100634.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables copper ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within response to copper ion ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosolic ribosome HDA PubMed 

General protein information

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Preferred Names
metallothionein 1C
NP_172240.1
  • metallothionein 1C (MT1C); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to copper ion; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: metallothionein 1A (TAIR:AT1G07600.1); Has 443 Blast hits to 367 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 106; Fungi - 13; Plants - 241; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2341447..2342148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100634.2 → NP_172240.1  metallothionein 1C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172240.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q38804
    UniProtKB/TrEMBL
    A0A5S9T5C1, A0A654E7K5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q38804.1

Gene LinkOut

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