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TGA9 bZIP transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837353, updated on 18-Sep-2024

Summary

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Official Symbol
TGA9
Official Full Name
bZIP transcription factor family protein
Primary source
TAIR:AT1G08320
Locus tag
AT1G08320
See related
Araport:AT1G08320
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
bZIP21; T23G18.22; TGACG (TGA) motif-binding protein 9
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Genomic context

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See TGA9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (2621860..2628594, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene no vein-like protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ARM repeat superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein Neighboring gene Endomembrane protein 70 protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Noshi M, et al. Plant Sci, 2016 Nov. PMID 27717447
  2. Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development. Murmu J, et al. Plant Physiol, 2010 Nov. PMID 20805327, Free PMC Article
  3. Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks. Deppmann CD, et al. Mol Biol Evol, 2006 Aug. PMID 16731568
  4. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833
  5. The TOPLESS interactome: a framework for gene repression in Arabidopsis. Causier B, et al. Plant Physiol, 2012 Jan. PMID 22065421, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. TGA9 is involved in reactive oxygen species mediated signaling during pathogen-associated molecular pattern responses.
    Title: Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
  2. Mutations in TGA9 and TGA10 lead to male sterility and differential defects in abaxial and adaxial anther lobe development similar to roxy1 roxy2 mutants. [TGA9]
    Title: Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001035921.3
NM_001035922.1
NM_001331769.1
NM_100705.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in anther development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in hydrogen peroxide mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in response to molecule of bacterial origin IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to molecule of bacterial origin IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
bZIP transcription factor family protein
NP_001030999.1
  • bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001318954.1
  • bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_563810.2
  • bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G06839.3); Has 1141 Blast hits to 1141 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 49; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2621860..2628594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331770.1 → NP_001321503.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT94, Q56W43, Q93XM6, Q9SGC7, Q9SJF8
    UniProtKB/TrEMBL
    A0A5S9T9F5, A0A654E8W1
    Conserved Domains (2) summary
    cd14708
    Location:178 → 230
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:259 → 334
    DOG1; Seed dormancy control

  2. NM_001331769.1 → NP_001318954.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WGU6, A0A178WGY8
    Conserved Domains (2) summary
    cd14708
    Location:54 → 106
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:135 → 210
    DOG1; Seed dormancy control

  3. NM_100705.4 → NP_563810.2  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563810.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT94, Q56W43, Q93XM6, Q9SGC7, Q9SJF8
    UniProtKB/TrEMBL
    A0A5S9T9F5, A0A654E8W1
    Conserved Domains (2) summary
    cd14708
    Location:178 → 230
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:259 → 334
    DOG1; Seed dormancy control

  4. NM_001035922.1 → NP_001030999.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030999.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT94, Q56W43, Q93XM6, Q9SGC7, Q9SJF8
    UniProtKB/TrEMBL
    A0A5S9T9F5, A0A654E8W1
    Conserved Domains (2) summary
    cd14708
    Location:178 → 230
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:259 → 334
    DOG1; Seed dormancy control

  5. NM_001035921.3 → NP_001030998.1  bZIP transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030998.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WGU6, A0A178WGY8
    Conserved Domains (2) summary
    cd14708
    Location:54 → 106
    bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
    pfam14144
    Location:135 → 210
    DOG1; Seed dormancy control
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93XM6.1

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