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CAX11 cation exchanger 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837416, updated on 18-Sep-2024

Summary

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Official Symbol
CAX11
Official Full Name
cation exchanger 11
Primary source
TAIR:AT1G08960
Locus tag
AT1G08960
See related
Araport:AT1G08960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Arabidopsis thaliana cation calcium exchanger 5; ATCAX11; AtCXX5; cation calcium exchanger 5; cation exchanger 11; CATION EXCHANGER 11; CCX5; F7G19.17; F7G19_17
Summary
Encodes a member of the Potassium-dependent sodium-calcium exchanger like-family that localizes to the plasma membrane and nuclear periphery, and has a role in mediating high-affinity K+ uptake and Na+ transport in yeast.
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Genomic context

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See CAX11 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (2879506..2882234)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Phosphoglycerate mutase family protein Neighboring gene tRNA-Pro Neighboring gene nuclear factor Y, subunit C9 Neighboring gene amidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of an AtCCX5 gene from Arabidopsis thaliana that involves in high-affinity K⁺ uptake and Na⁺ transport in yeast. Zhang X, et al. Biochem Biophys Res Commun, 2011 Oct 14. PMID 21945443
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. these findings suggest that the AtCCX5 is a novel transport protein involves in mediating high-affinity K(+) uptake and Na(+) transport in yeast.
    Title: Characterization of an AtCCX5 gene from Arabidopsis thaliana that involves in high-affinity K⁺ uptake and Na⁺ transport in yeast.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_100767.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium:sodium antiporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables potassium ion transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sodium ion transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within potassium ion transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within sodium ion transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear periphery IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
cation exchanger 11
NP_172370.3
  • cation exchanger 11 (CAX11); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: calcium exchanger 7 (TAIR:AT5G17860.1); Has 4219 Blast hits to 2943 proteins in 815 species: Archae - 83; Bacteria - 1788; Metazoa - 1182; Fungi - 291; Plants - 224; Viruses - 0; Other Eukaryotes - 651 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2879506..2882234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100767.6 → NP_172370.3  cation exchanger 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172370.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04034
    UniProtKB/TrEMBL
    A0A178W3U3, A0A5S9TCP4
    Conserved Domains (1) summary
    PLN03151
    Location:72 → 539
    PLN03151; cation/calcium exchanger; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O04034.1

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