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Nucleolar GTP-binding protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837569, updated on 18-Sep-2024

Summary

Official Full Name
Nucleolar GTP-binding protein
Primary source
TAIR:AT1G10300
Locus tag
AT1G10300
See related
Araport:AT1G10300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14N23.18; F14N23_18
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Genomic context

Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (3377878..3380414)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glutamine-rich protein 23 Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene dynamin-like protein 6 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

General gene information

NM_100904.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTP binding IDA
Inferred from Direct Assay
more info
PubMed 
enables GTPase activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Nucleolar GTP-binding protein
NP_172501.1
  • Nucleolar GTP-binding protein; FUNCTIONS IN: GTP binding; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), NOG, C-terminal (InterPro:IPR012973); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G50920.1); Has 8833 Blast hits to 8598 proteins in 2008 species: Archae - 347; Bacteria - 5084; Metazoa - 895; Fungi - 393; Plants - 246; Viruses - 2; Other Eukaryotes - 1866 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3377878..3380414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331896.1NP_001322861.1  Nucleolar GTP-binding protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AV84, A0A7G2DVQ7
  2. NM_001331897.1NP_001322862.1  Nucleolar GTP-binding protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DVQ7, F4I4A6
  3. NM_100904.1NP_172501.1  Nucleolar GTP-binding protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172501.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DVQ7, F4I4A6
    Conserved Domains (3) summary
    cd01897
    Location:198368
    NOG; Nucleolar GTP-binding protein (NOG)
    COG1084
    Location:34366
    Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]
    pfam08155
    Location:420472
    NOGCT; NOGCT (NUC087) domain