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Endosomal targeting BRO1-like domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837891, updated on 18-Sep-2024

Summary

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Official Full Name
Endosomal targeting BRO1-like domain-containing protein
Primary source
TAIR:AT1G13310
Locus tag
AT1G13310
See related
Araport:AT1G13310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6J4.7; T6J4_7
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (4561028..4563160, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene C2H2-like zinc finger protein Neighboring gene myb-like transcription factor family protein Neighboring gene protein phosphatase 2A subunit A3 Neighboring gene Tat-binding protein 1(Tbp-1)-interacting protein (TBPIP) Neighboring gene Regulator of Vps4 activity in the MVB pathway protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_101202.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Endosomal targeting BRO1-like domain-containing protein
NP_563927.3
  • Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4561028..4563160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101202.5 → NP_563927.3  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563927.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WF32, A0A654EB03, Q9FX66
    Conserved Domains (1) summary
    cd09247
    Location:6 → 363
    BRO1_Alix_like_2; Protein-interacting Bro1-like domain of an Uncharacterized family of the BRO1_Alix_like superfamily
Nucleotide Protein
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