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Protein phosphatase 2A regulatory B subunit family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837906, updated on 18-Sep-2024

Summary

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Official Full Name
Protein phosphatase 2A regulatory B subunit family protein
Primary source
TAIR:AT1G13460
Locus tag
AT1G13460
See related
Araport:AT1G13460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6J4.19; T6J4_19
Summary
Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes.
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (4615767..4618449)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Homeodomain-like superfamily protein Neighboring gene hypothetical protein (DUF1262) Neighboring gene hypothetical protein (DUF1262)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein phosphatase 2A holoenzyme is targeted to peroxisomes by piggybacking and positively affects peroxisomal β-oxidation. Kataya AR, et al. Plant Physiol, 2015 Feb. PMID 25489022, Free PMC Article
  2. Diversity in subcellular targeting of the PP2A B'eta subfamily members. Matre P, et al. Planta, 2009 Oct. PMID 19672620
  3. The Brassinosteroid-Activated BRI1 Receptor Kinase Is Switched off by Dephosphorylation Mediated by Cytoplasm-Localized PP2A B' Subunits. Wang R, et al. Mol Plant, 2016 Jan 4. PMID 26517938
  4. PP2A activates brassinosteroid-responsive gene expression and plant growth by dephosphorylating BZR1. Tang W, et al. Nat Cell Biol, 2011 Feb. PMID 21258370, Free PMC Article
  5. Identification of BZR1-interacting proteins as potential components of the brassinosteroid signaling pathway in Arabidopsis through tandem affinity purification. Wang C, et al. Mol Cell Proteomics, 2013 Dec. PMID 24019147, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_101216.2
NM_202087.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of brassinosteroid mediated signaling pathway IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in positive regulation of fatty acid beta-oxidation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in peroxisome IDA
Inferred from Direct Assay
more info
 PubMed 
part_of protein phosphatase type 2A complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Protein phosphatase 2A regulatory B subunit family protein
NP_172803.1
  • Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: peroxisome, protein phosphatase type 2A complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G26020.2); Has 1181 Blast hits to 1162 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 160; Plants - 300; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink).
NP_973816.1
  • Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: peroxisome, protein phosphatase type 2A complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G26020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4615767..4618449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202087.2 → NP_973816.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973816.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0V836, Q8LF36, Q9FX52
    UniProtKB/TrEMBL
    A0A178WBX5, A0A5S9U9F1, A0A654EAJ4
    Conserved Domains (2) summary
    PLN00122
    Location:389 → 491
    PLN00122; serine/threonine protein phosphatase 2A; Provisional
    pfam01603
    Location:80 → 483
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)

  2. NM_101216.2 → NP_172803.1  Protein phosphatase 2A regulatory B subunit family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172803.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0V836, Q8LF36, Q9FX52
    UniProtKB/TrEMBL
    A0A178WBX5, A0A5S9U9F1, A0A654EAJ4
    Conserved Domains (2) summary
    PLN00122
    Location:389 → 491
    PLN00122; serine/threonine protein phosphatase 2A; Provisional
    pfam01603
    Location:80 → 483
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LF36.2

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