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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837926, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G13650
Locus tag
AT1G13650
See related
Araport:AT1G13650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21F23.9; F21F23_9
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (4680290..4682382, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA glycosylase superfamily protein Neighboring gene Phosphatidylinositol 3- and 4-kinase family protein Neighboring gene pseudo Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001332081.1
NM_101235.5
NM_179324.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of asymmetric cell division IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_172822.2
  • BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink).
NP_849655.1
  • BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4680290..4682382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332080.1 → NP_001320494.1  uncharacterized protein AT1G13650 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WE77, A0A384L148, A0A654EB36, Q9LMY2

  2. NM_179324.3 → NP_849655.1  uncharacterized protein AT1G13650 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849655.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WE38, A0A654EB36, A2RVL9
    Conserved Domains (1) summary
    PTZ00121
    Location:182 → 273
    PTZ00121; MAEBL; Provisional

  3. NM_001332081.1 → NP_001320495.1  uncharacterized protein AT1G13650 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WE77, A0A384L148, A0A654EB36, Q9LMY2

  4. NM_101235.5 → NP_172822.2  uncharacterized protein AT1G13650 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172822.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WE38, A0A654EB36, A2RVL9
    Conserved Domains (1) summary
    PTZ00121
    Location:182 → 273
    PTZ00121; MAEBL; Provisional
Nucleotide Protein
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