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Wall-associated kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838195, updated on 18-Sep-2024

Summary

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Official Full Name
Wall-associated kinase family protein
Primary source
TAIR:AT1G16260
Locus tag
AT1G16260
See related
Araport:AT1G16260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3O9.6; F3O9_6
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (5559498..5562192, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Target SNARE coiled-coil domain protein Neighboring gene syntaxin of plants 51 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein Neighboring gene RNA helicase 36 Neighboring gene transglycosylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH. Brown BA, et al. Plant Physiol, 2008 Feb. PMID 18055587, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001198080.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables polysaccharide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Wall-associated kinase family protein
NP_001185009.1
  • Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF calcium-binding (InterPro:IPR013091), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Wall-associated kinase family protein (TAIR:AT1G79670.1).
NP_173076.1
  • Wall-associated kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF calcium-binding (InterPro:IPR013091), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Wall-associated kinase family protein (TAIR:AT1G79670.1); Has 123075 Blast hits to 119967 proteins in 4481 species: Archae - 119; Bacteria - 13868; Metazoa - 46954; Fungi - 10147; Plants - 33759; Viruses - 489; Other Eukaryotes - 17739 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5559498..5562192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332218.1 → NP_001323321.1  Wall-associated kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AWN7, A0A654EAF6

  2. NM_101492.3 → NP_173076.1  Wall-associated kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173076.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SA25
    UniProtKB/TrEMBL
    A0A178WDV6, A0A654EAF6
    Conserved Domains (3) summary
    pfam08488
    Location:171 → 270
    WAK; Wall-associated kinase
    cd14066
    Location:396 → 663
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam13947
    Location:33 → 96
    GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding

  3. NM_001198080.1 → NP_001185009.1  Wall-associated kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185009.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SA25
    UniProtKB/TrEMBL
    A0A178WDV6, A0A654EAF6
    Conserved Domains (3) summary
    pfam08488
    Location:171 → 270
    WAK; Wall-associated kinase
    cd14066
    Location:396 → 663
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam13947
    Location:33 → 96
    GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SA25.1

Gene LinkOut

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