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SLP2 Calcineurin-like metallo-phosphoesterase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838428, updated on 18-Sep-2024

Summary

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Official Symbol
SLP2
Official Full Name
Calcineurin-like metallo-phosphoesterase superfamily protein
Primary source
TAIR:AT1G18480
Locus tag
AT1G18480
See related
Araport:AT1G18480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtSLP2; F15H18.29; Shewenella-like protein phosphatase 2
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Genomic context

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See SLP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (6361586..6363061)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene actin-related protein 4 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Transmembrane Fragile-X-F-associated protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene uncharacterized protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637) Neighboring gene methylthioalkylmalate synthase-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Two ancient bacterial-like PPP family phosphatases from Arabidopsis are highly conserved plant proteins that possess unique properties. Uhrig RG, et al. Plant Physiol, 2011 Dec. PMID 21976480, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_101705.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables manganese ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Calcineurin-like metallo-phosphoesterase superfamily protein
NP_564053.1
  • Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6361586..6363061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101705.2 → NP_564053.1  Calcineurin-like metallo-phosphoesterase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564053.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LG84, Q944L7
    UniProtKB/TrEMBL
    A0A5S9V226, A0A654ECH3
    Conserved Domains (2) summary
    cd07425
    Location:57 → 343
    MPP_Shelphs; Shewanella-like phosphatases, metallophosphatase domain
    pfam00149
    Location:55 → 193
    Metallophos; Calcineurin-like phosphoesterase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q944L7.1

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