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ubiquinone biosynthesis COQ9-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838497, updated on 18-Sep-2024

Summary

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Official Full Name
ubiquinone biosynthesis COQ9-like protein
Primary source
TAIR:AT1G19140
Locus tag
AT1G19140
See related
Araport:AT1G19140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14D16.30; F14D16_30
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (6610652..6612609, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene RmlC-like jelly roll fold protein Neighboring gene ncRNA Neighboring gene PSI type II chlorophyll a/b-binding protein (Lhca2*1) Neighboring gene F-box family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Arabidopsis thaliana Coq9 in the CoQ Biosynthetic Pathway. Hu M, et al. Metabolites, 2023 Jun 30. PMID 37512520, Free PMC Article
  2. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_101772.4
NM_202132.2

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
ubiquinone biosynthesis COQ9-like protein
NP_564074.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 748 Blast hits to 748 proteins in 260 species: Archae - 0; Bacteria - 218; Metazoa - 126; Fungi - 101; Plants - 39; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink).
NP_973861.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6610652..6612609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101772.4 → NP_564074.1  ubiquinone biosynthesis COQ9-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564074.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WF98, A0A5S9V3F6, Q9LMB2
    Conserved Domains (1) summary
    TIGR02396
    Location:92 → 276
    diverge_rpsU; rpsU-divergently transcribed protein

  2. NM_202132.2 → NP_973861.1  ubiquinone biosynthesis COQ9-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973861.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WF98, A0A5S9V3F6, F4IE14
    Conserved Domains (2) summary
    TIGR02396
    Location:92 → 277
    diverge_rpsU; rpsU-divergently transcribed protein
    pfam08511
    Location:196 → 267
    COQ9; COQ9
Nucleotide Protein
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