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NmrA-like negative transcriptional regulator family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838541, updated on 18-Sep-2024

Summary

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Official Full Name
NmrA-like negative transcriptional regulator family protein
Primary source
TAIR:AT1G19540
Locus tag
AT1G19540
See related
Araport:AT1G19540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18O14.30; F18O14_30
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (6765653..6768290)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pentatricopeptide (PPR) repeat-containing protein Neighboring gene DNA polymerase epsilon catalytic subunit A Neighboring gene Glutathione S-transferase family protein Neighboring gene miscRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_101812.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NmrA-like negative transcriptional regulator family protein
NP_173385.1
  • NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2081 Blast hits to 2077 proteins in 492 species: Archae - 4; Bacteria - 817; Metazoa - 4; Fungi - 543; Plants - 557; Viruses - 7; Other Eukaryotes - 149 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6765653..6768290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332397.1 → NP_001320975.1  NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8APG5, A0A5S9V6K7

  2. NM_101812.5 → NP_173385.1  NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173385.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9V6K7, A0A654EGA6, Q29PX7
    Conserved Domains (1) summary
    pfam05368
    Location:5 → 239
    NmrA; NmrA-like family
Nucleotide Protein
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