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SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838570, updated on 18-Sep-2024

Summary

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Official Full Name
SAUR-like auxin-responsive protein family
Primary source
TAIR:AT1G19830
Locus tag
AT1G19830
See related
Araport:AT1G19830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14P1.18; F14P1_18; SAUR54; SMALL AUXIN UPREGULATED RNA 54
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (6852116..6852945)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene trigalactosyldiacylglycerol 1 Neighboring gene miscRNA Neighboring gene filament-like protein (DUF869) Neighboring gene SAUR-like auxin-responsive protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade. van Mourik H, et al. BMC Plant Biol, 2017 Dec 19. PMID 29258424, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_101837.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to auxin IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
SAUR-like auxin-responsive protein family
NP_173411.1
  • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G75580.1); Has 1272 Blast hits to 1255 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1271; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6852116..6852945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101837.4 → NP_173411.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173411.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FXI0
    UniProtKB/TrEMBL
    A0A178WNG5, A0A5S9V8Z8, A0A654ED94
    Conserved Domains (1) summary
    PLN03090
    Location:1 → 111
    PLN03090; auxin-responsive family protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FXI0.1

Gene LinkOut

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