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DUF241 domain protein, putative (DUF241) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838640, updated on 18-Sep-2024

Summary

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Official Full Name
DUF241 domain protein, putative (DUF241)
Primary source
TAIR:AT1G20520
Locus tag
AT1G20520
See related
Araport:AT1G20520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5M15.16; F5M15_16
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (7106922..7107617, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene OPC-8:0 CoA ligase1 Neighboring gene ncRNA Neighboring gene girdin (DUF630 and DUF632) Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene O-fucosyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_101902.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in root development IEA
Inferred from Electronic Annotation
more info
  
involved_in shoot system development IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
DUF241 domain protein, putative (DUF241)
NP_173476.1
  • Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT1G76210.1); Has 416 Blast hits to 408 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7106922..7107617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101902.1 → NP_173476.1  DUF241 domain protein, putative (DUF241) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173476.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EBE9, A0ME78, Q9LMV9
    Conserved Domains (1) summary
    pfam03087
    Location:6 → 223
    DUF241; Arabidopsis protein of unknown function
Nucleotide Protein
Heading Accession and Version

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