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Cysteine/Histidine-rich C1 domain family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838693, updated on 18-Sep-2024

Summary

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Official Full Name
Cysteine/Histidine-rich C1 domain family protein
Primary source
TAIR:AT1G20990
Locus tag
AT1G20990
See related
Araport:AT1G20990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9H16.2; F9H16_2
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (7330256..7332100, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene calponin-like domain protein Neighboring gene squamosa promoter binding protein-like 14 Neighboring gene ncRNA Neighboring gene PLATZ transcription factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_101952.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Cysteine/Histidine-rich C1 domain family protein
NP_173523.1
  • Cysteine/Histidine-rich C1 domain family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G16050.1); Has 1603 Blast hits to 716 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 20; Fungi - 0; Plants - 1573; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7330256..7332100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101952.2 → NP_173523.1  Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173523.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WAG8, A0A5S9VBW2, A0A654EGR5, F4HWC5, Q9SYN8
    Conserved Domains (1) summary
    pfam03107
    Location:122 → 174
    C1_2; C1 domain
Nucleotide Protein
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