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Nucleotide-sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838703, updated on 18-Sep-2024

Summary

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Official Full Name
Nucleotide-sugar transporter family protein
Primary source
TAIR:AT1G21070
Locus tag
AT1G21070
See related
Araport:AT1G21070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22I11.10; T22I11_10; UDP-Rha/UDP-Gal transporter 2; URGT2
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (7375869..7378227, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Serine/Threonine-kinase, putative (Protein of unknown function, DUF547) Neighboring gene secondary thiamine-phosphate synthase enzyme Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene Cupredoxin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. New steps in mucilage biosynthesis revealed by analysis of the transcriptome of the UDP-rhamnose/UDP-galactose transporter 2 mutant. Parra-Rojas JP, et al. J Exp Bot, 2019 Oct 15. PMID 31145803, Free PMC Article
  2. The Golgi localized bifunctional UDP-rhamnose/UDP-galactose transporter family of Arabidopsis. Rautengarten C, et al. Proc Natl Acad Sci U S A, 2014 Aug 5. PMID 25053812, Free PMC Article
  3. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_101961.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables antiporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within mucilage biosynthetic process involved in seed coat development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Nucleotide-sugar transporter family protein
NP_564133.1
  • Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G76670.1); Has 2012 Blast hits to 2008 proteins in 220 species: Archae - 0; Bacteria - 26; Metazoa - 397; Fungi - 317; Plants - 1060; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7375869..7378227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101961.4 → NP_564133.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564133.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GYG5, Q8LG49, Q9LPU2
    UniProtKB/TrEMBL
    A0A178WCN2, A0A5S9VC80
    Conserved Domains (1) summary
    cl26744
    Location:33 → 300
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LPU2.1

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