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Sec14p-like phosphatidylinositol transfer family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838823, updated on 18-Sep-2024

Summary

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Official Full Name
Sec14p-like phosphatidylinositol transfer family protein
Primary source
TAIR:AT1G22180
Locus tag
AT1G22180
See related
Araport:AT1G22180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16L1.9; F16L1_9
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (7828326..7830424, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene senescence-associated family protein (DUF581) Neighboring gene Phosphoglycerate mutase family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Endoplasmic reticulum vesicle transporter protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001332542.1
NM_102068.5
NM_180617.1
NM_202153.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Sec14p-like phosphatidylinositol transfer family protein
NP_173637.3
  • Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 2763 Blast hits to 2754 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 989; Fungi - 606; Plants - 846; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink).
NP_850948.1
  • Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 2252 Blast hits to 2246 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 862; Fungi - 537; Plants - 585; Viruses - 0; Other Eukaryotes - 268 (source: NCBI BLink).
NP_973882.1
  • Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7828326..7830424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202153.2 → NP_973882.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973882.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DVB6, Q8VY48
    Conserved Domains (1) summary
    smart00516
    Location:25 → 178
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)

  2. NM_102068.5 → NP_173637.3  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173637.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W4T0, A0A654EDZ0, B9DGK4, Q9LM14
    Conserved Domains (2) summary
    smart00516
    Location:90 → 243
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    smart01100
    Location:25 → 70
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

  3. NM_180617.1 → NP_850948.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850948.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DVB6, Q8VY48
    Conserved Domains (1) summary
    smart00516
    Location:25 → 178
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)

  4. NM_001332542.1 → NP_001322892.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W4T0, A0A654EDZ0, B9DGK4, Q9LM14
    Conserved Domains (2) summary
    smart00516
    Location:90 → 243
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    smart01100
    Location:25 → 70
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
Nucleotide Protein
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