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MICOS complex subunit Mic10-like protein (DUF543) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838858, updated on 18-Sep-2024

Summary

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Official Full Name
MICOS complex subunit Mic10-like protein (DUF543)
Primary source
TAIR:AT1G22520
Locus tag
AT1G22520
See related
Araport:AT1G22520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12K8.27; F12K8_27
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (7952974..7954546, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) Neighboring gene ncRNA Neighboring gene PATELLIN 2 Neighboring gene Major facilitator superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtMic60 Is Involved in Plant Mitochondria Lipid Trafficking and Is Part of a Large Complex. Michaud M, et al. Curr Biol, 2016 Mar 7. PMID 26898467, Free PMC Article
  2. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001160885.1
NM_102101.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of MICOS complex IEA
Inferred from Electronic Annotation
more info
  
part_of inner mitochondrial membrane protein complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MICOS complex subunit Mic10-like protein (DUF543)
NP_001154357.1
  • Domain of unknown function (DUF543); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G72170.1); Has 115 Blast hits to 115 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
NP_564173.1
  • Domain of unknown function (DUF543); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G72170.1); Has 107 Blast hits to 107 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7952974..7954546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102101.4 → NP_564173.1  MICOS complex subunit Mic10-like protein (DUF543) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564173.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67XY2, Q8LAJ9
    UniProtKB/TrEMBL
    A0A178WKB7, A0A7G2DYQ6
    Conserved Domains (1) summary
    pfam04418
    Location:8 → 73
    DUF543; Domain of unknown function (DUF543)

  2. NM_001160885.1 → NP_001154357.1  MICOS complex subunit Mic10-like protein (DUF543) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154357.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4I1E5
    Conserved Domains (1) summary
    pfam04418
    Location:1 → 73
    DUF543; Domain of unknown function (DUF543)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LAJ9.1

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