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RNS3 ribonuclease 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839225, updated on 18-Sep-2024

Summary

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Official Symbol
RNS3
Official Full Name
ribonuclease 3
Primary source
TAIR:AT1G26820
Locus tag
AT1G26820
See related
Araport:AT1G26820
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ribonuclease 3; RIBONUCLEASE 3; T24P13.23
Summary
Encodes ribonuclease RNS3.
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Genomic context

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See RNS3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (9292446..9293862, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene FBD domain family Neighboring gene ncRNA Neighboring gene cullin 3 Neighboring gene origin recognition complex protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_102446.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables ribonuclease T2 activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ribonuclease 3
NP_564264.1
  • ribonuclease 3 (RNS3); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2544 Blast hits to 2543 proteins in 498 species: Archae - 0; Bacteria - 415; Metazoa - 284; Fungi - 227; Plants - 1506; Viruses - 7; Other Eukaryotes - 105 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9292446..9293862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102446.3 → NP_564264.1  ribonuclease 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564264.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P42815
    UniProtKB/TrEMBL
    A0A178W614, A0A5S9W2J3
    Conserved Domains (1) summary
    pfam00445
    Location:22 → 205
    Ribonuclease_T2; Ribonuclease T2 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42815.1

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