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GAE2 UDP-D-glucuronate 4-epimerase 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839289, updated on 18-Sep-2024

Summary

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Official Symbol
GAE2
Official Full Name
UDP-D-glucuronate 4-epimerase 2
Primary source
TAIR:AT1G02000
Locus tag
AT1G02000
See related
Araport:AT1G02000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22M8.13; F22M8_13; UDP-D-glucuronate 4-epimerase 2
Summary
UDP-D-glucuronate 4-epimerase
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Genomic context

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See GAE2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (345516..347603)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene FAD-binding Berberine family protein Neighboring gene uncharacterized protein Neighboring gene secretory 1A Neighboring gene nitroreductase family protein Neighboring gene C2H2-like zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The biosynthesis of D-Galacturonate in plants. functional cloning and characterization of a membrane-anchored UDP-D-Glucuronate 4-epimerase from Arabidopsis. Mølhøj M, et al. Plant Physiol, 2004 Jul. PMID 15247385, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_100080.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables UDP-glucuronate 4-epimerase activity IEA
Inferred from Electronic Annotation
more info
  
enables UDP-glucuronate 4-epimerase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
UDP-D-glucuronate 4-epimerase 2
NP_171702.1
  • UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    345516..347603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100080.4 → NP_171702.1  UDP-D-glucuronate 4-epimerase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171702.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WRB6, Q8LFM5, Q9LPC1
    UniProtKB/TrEMBL
    A0A178WEE4, A0A5S9S5I9
    Conserved Domains (1) summary
    cl21454
    Location:94 → 422
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LPC1.1

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