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NC domain-containing protein-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839358, updated on 18-Sep-2024

Summary

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Official Full Name
NC domain-containing protein-like protein
Primary source
TAIR:AT1G01225
Locus tag
AT1G01225
See related
Araport:AT1G01225
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (95935..97407)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase, subunit M, archaeal Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene L-fucokinase/GDP-L-fucose pyrophosphorylase Neighboring gene ORMDL family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_100005.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NC domain-containing protein-like protein
NP_563621.1
  • NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    95935..97407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100005.3 → NP_563621.1  NC domain-containing protein-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563621.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9S0H5, Q29PY0, Q8LBP8
    Conserved Domains (1) summary
    pfam04970
    Location:26 → 161
    LRAT; Lecithin retinol acyltransferase
Nucleotide Protein
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