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NAD(P)-linked oxidoreductase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839524, updated on 18-Sep-2024

Summary

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Official Full Name
NAD(P)-linked oxidoreductase superfamily protein
Primary source
TAIR:AT1G04420
Locus tag
AT1G04420
See related
Araport:AT1G04420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19P19.12; F19P19_12
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (1191519..1193884)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cryptochrome 2 Neighboring gene Lactate/malate dehydrogenase family protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701
  2. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Rutschow H, et al. Plant Physiol, 2008 Sep. PMID 18633119, Free PMC Article
  3. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  5. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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NM_100322.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in extracellular region HDA PubMed 

General protein information

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Preferred Names
NAD(P)-linked oxidoreductase superfamily protein
NP_171937.1
  • NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1191519..1193884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100322.5 → NP_171937.1  NAD(P)-linked oxidoreductase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171937.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WJS5, A0A5S9SJ24, A0A654E8S5, Q8VZ23
    Conserved Domains (1) summary
    cd19094
    Location:68 → 402
    AKR_Tas-like; Escherichia coli Tas protein and similar proteins
Nucleotide Protein
Heading Accession and Version

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