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CAD1 MAC/Perforin domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839846, updated on 18-Sep-2024

Summary

Official Symbol
CAD1
Official Full Name
MAC/Perforin domain-containing protein
Primary source
TAIR:AT1G29690
Locus tag
AT1G29690
See related
Araport:AT1G29690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
constitutively activated cell death 1; F15D2.24; F15D2_24; necrotic spotted lesion 2; NSL2
Summary
Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic <i>cad1-1</i> mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.
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Genomic context

See CAD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (10379020..10382153, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene histone acetyltransferase (DUF1264) Neighboring gene ncRNA Neighboring gene Metallo-hydrolase/oxidoreductase superfamily protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
MAC/Perforin domain-containing protein
NP_564333.1
  • constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    10379020..10382153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102709.4NP_564333.1  MAC/Perforin domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564333.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q940R0, Q9C7N2
    UniProtKB/TrEMBL
    A0A178WDY6, A0A5S9WBI2, A0A654EEU2
    Conserved Domains (1) summary
    pfam01823
    Location:116300
    MACPF; MAC/Perforin domain