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PLATZ transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839990, updated on 18-Sep-2024

Summary

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Official Full Name
PLATZ transcription factor family protein
Primary source
TAIR:AT1G31040
Locus tag
AT1G31040
See related
Araport:AT1G31040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17F8.4
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (11069510..11072564, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene N-acetylglucosamine-1-phosphate uridylyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORESARA 15, a PLATZ transcription factor, controls root meristem size through auxin and cytokinin signalling-related pathways. Timilsina R, et al. J Exp Bot, 2022 Apr 18. PMID 35139177
  2. ORESARA15 Acts Synergistically with ANGUSTIFOLIA3 and Separately from AINTEGUMENTA to Promote Cell Proliferation during Leaf Growth. Jun SE, et al. Int J Mol Sci, 2019 Dec 29. PMID 31905806, Free PMC Article
  3. ORESARA15, a PLATZ transcription factor, mediates leaf growth and senescence in Arabidopsis. Kim JH, et al. New Phytol, 2018 Oct. PMID 29949656
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ORE15 expression partially overlapped with AN3/GIF1 and ANT expression along the midvein in the proximal region of the leaf blade in young leaves. Genetic analysis revealed that ORE15 may function synergistically with AN3 to control leaf growth as a positive regulator of cell proliferation.
    Title: ORESARA15 Acts Synergistically with ANGUSTIFOLIA3 and Separately from AINTEGUMENTA to Promote Cell Proliferation during Leaf Growth.
  2. ORE15 enhanced leaf growth by promoting the rate and duration of cell proliferation in the earlier stage and suppressed leaf senescence in the later stage by modulating the GROWTH-REGULATING FACTOR (GRF)/GRF-INTERACTING FACTOR regulatory pathway.[ORESARA15]
    Title: ORESARA15, a PLATZ transcription factor, mediates leaf growth and senescence in Arabidopsis.
Submit: New GeneRIF Correction

General gene information

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Markers

NM_102842.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within leaf development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within leaf senescence IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to auxin IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in response to cytokinin IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
PLATZ transcription factor family protein
NP_174390.2
  • PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 411 Blast hits to 411 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    11069510..11072564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102842.3 → NP_174390.2  PLATZ transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174390.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WJ77, F4I7U9
    Conserved Domains (1) summary
    pfam04640
    Location:73 → 143
    PLATZ; PLATZ transcription factor
Nucleotide Protein
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