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Nucleotide-sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840299, updated on 18-Sep-2024

Summary

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Official Full Name
Nucleotide-sugar transporter family protein
Primary source
TAIR:AT1G34020
Locus tag
AT1G34020
See related
Araport:AT1G34020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12G12.16; F12G12_16; UDP-Rha/UDP-Gal transporter 6; URGT6
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (12366810..12370014)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene S-locus glycoprotein family protein Neighboring gene Ribosomal protein S13/S18 family Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Two Arabidopsis thaliana Plasma Membrane Transporters Able to Transport Glucose 1-Phosphate. Malinova I, et al. Plant Cell Physiol, 2020 Feb 1. PMID 31722406
  2. The Golgi localized bifunctional UDP-rhamnose/UDP-galactose transporter family of Arabidopsis. Rautengarten C, et al. Proc Natl Acad Sci U S A, 2014 Aug 5. PMID 25053812, Free PMC Article
  3. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103124.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables D-glucose transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables antiporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within D-glucose transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Nucleotide-sugar transporter family protein
NP_564433.1
  • Nucleotide-sugar transporter family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G09810.1); Has 1634 Blast hits to 1631 proteins in 184 species: Archae - 0; Bacteria - 8; Metazoa - 360; Fungi - 216; Plants - 891; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12366810..12370014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333079.1 → NP_001321552.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L9B4, Q9FDZ5
    UniProtKB/TrEMBL
    A0A178W3K3, A0A5S9WIN3, A0A7G2DZZ3
    Conserved Domains (1) summary
    cl26744
    Location:23 → 298
    TPT; Triose-phosphate Transporter family

  2. NM_001333080.1 → NP_001321551.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L9B4, Q9FDZ5
    UniProtKB/TrEMBL
    A0A178W3K3, A0A5S9WIN3, A0A7G2DZZ3
    Conserved Domains (1) summary
    cl26744
    Location:23 → 298
    TPT; Triose-phosphate Transporter family

  3. NM_103124.4 → NP_564433.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564433.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L9B4, Q9FDZ5
    UniProtKB/TrEMBL
    A0A178W3K3, A0A5S9WIN3, A0A7G2DZZ3
    Conserved Domains (1) summary
    cl26744
    Location:23 → 298
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FDZ5.1

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