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UBC31 ubiquitin-conjugating enzyme 31 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840541, updated on 18-Sep-2024

Summary

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Official Symbol
UBC31
Official Full Name
ubiquitin-conjugating enzyme 31
Primary source
TAIR:AT1G36340
Locus tag
AT1G36340
See related
Araport:AT1G36340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7F23.6; F7F23_6; ubiquitin-conjugating enzyme 31
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Genomic context

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See UBC31 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (13683663..13685066, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene GCK domain protein Neighboring gene tRNA-Arg Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001333179.1
NM_103322.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
ubiquitin-conjugating enzyme 31
NP_001319154.1
  • ubiquitin-conjugating enzyme 31 (UBC31); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: vacuole; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 11 (TAIR:AT3G08690.2); Has 10356 Blast hits to 10339 proteins in 396 species: Archae - 0; Bacteria - 4; Metazoa - 4631; Fungi - 2141; Plants - 1907; Viruses - 26; Other Eukaryotes - 1647 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    13683663..13685066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333179.1 → NP_001319154.1  ubiquitin-conjugating enzyme 31 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C8X7
    UniProtKB/TrEMBL
    A0A654EKS0
    Conserved Domains (1) summary
    COG5078
    Location:5 → 154
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

  2. NM_103322.3 → NP_564472.1  ubiquitin-conjugating enzyme 31 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564472.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C8X7
    UniProtKB/TrEMBL
    A0A654EKS0
    Conserved Domains (1) summary
    COG5078
    Location:5 → 154
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C8X7.1

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