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AAP5 amino acid permease 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841013, updated on 18-Sep-2024

Summary

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Official Symbol
AAP5
Official Full Name
amino acid permease 5
Primary source
TAIR:AT1G44100
Locus tag
AT1G44100
See related
Araport:AT1G44100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
amino acid permease 5; T7O23.19; T7O23_19
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Genomic context

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See AAP5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (16764392..16767685, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glycine-rich protein Neighboring gene gibberellin 20-oxidase 5 Neighboring gene ncRNA Neighboring gene Cyclin A1;1 Neighboring gene CELLULOSE SYNTHASE INTERACTIVE 2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Low and high affinity amino acid H+-cotransporters for cellular import of neutral and charged amino acids. Fischer WN, et al. Plant J, 2002 Mar. PMID 12148530
  2. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. Fischer WN, et al. J Biol Chem, 1995 Jul 7. PMID 7608199
  3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
  4. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_103536.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables amino acid transmembrane transporter activity TAS
Traceable Author Statement
more info
 PubMed 
enables basic amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid transmembrane transport TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within basic amino acid transport TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
amino acid permease 5
NP_175076.2
  • amino acid permease 5 (AAP5); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 2256 Blast hits to 2241 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 536; Fungi - 289; Plants - 1230; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    16764392..16767685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103536.4 → NP_175076.2  amino acid permease 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175076.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q39136, Q8GUM3, Q9C6Y2
    UniProtKB/TrEMBL
    A0A178W5P0, A0A5S9WMF6, A0A654EFY3
    Conserved Domains (1) summary
    pfam01490
    Location:28 → 468
    Aa_trans; Transmembrane amino acid transporter protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GUM3.1

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