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DPMS3 dolichol-phosphate mannosyltransferase-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841232, updated on 18-Sep-2024

Summary

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Official Symbol
DPMS3
Official Full Name
dolichol-phosphate mannosyltransferase-like protein
Primary source
TAIR:AT1G48140
Locus tag
AT1G48140
See related
Araport:AT1G48140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
dolichol phosphate mannose synthase 3; F21D18.14; F21D18_14
Summary
Encodes a subunit of the dolichol phosphate mannase synthase (DPMS) complex that may serve as membrane anchors for the catalytic core, DPMS1, or provide catalytic assistance. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis.
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Genomic context

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See DPMS3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (17781988..17784211)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 7 long form-like protein Neighboring gene 1-cysteine peroxiredoxin 1 Neighboring gene plant mobile domain protein Neighboring gene MADS-box transcription factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DOLICHOL PHOSPHATE MANNOSE SYNTHASE1 mediates the biogenesis of isoprenyl-linked glycans and influences development, stress response, and ammonium hypersensitivity in Arabidopsis. Jadid N, et al. Plant Cell, 2011 May. PMID 21558543, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. In plants, Dol-P-Man is synthesized when Dol-P-Man synthase1 (DPMS1), the catalytic core, interacts with two binding proteins, DPMS2 and DPMS3, that may serve as membrane anchors for DPMS1 or provide catalytic assistance.
    Title: DOLICHOL PHOSPHATE MANNOSE SYNTHASE1 mediates the biogenesis of isoprenyl-linked glycans and influences development, stress response, and ammonium hypersensitivity in Arabidopsis.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001198239.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
contributes_to dolichyl-phosphate beta-D-mannosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of dolichol-phosphate-mannose synthase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase-like protein
NP_001185168.1
  • dolichol-phosphate mannosyltransferase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol-phosphate mannosyltransferase subunit 3 (InterPro:IPR013174).
NP_564521.1
  • dolichol-phosphate mannosyltransferase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol-phosphate mannosyltransferase subunit 3 (InterPro:IPR013174); Has 82 Blast hits to 81 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 13; Plants - 38; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17781988..17784211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103710.3 → NP_564521.1  dolichol-phosphate mannosyltransferase-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564521.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LEQ4, Q9LNG6
    UniProtKB/TrEMBL
    A0A178WDH1, A0A5S9WPU4
    Conserved Domains (1) summary
    pfam08285
    Location:1 → 84
    DPM3; Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)

  2. NM_001198239.1 → NP_001185168.1  dolichol-phosphate mannosyltransferase-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185168.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HWT0
    Conserved Domains (1) summary
    pfam08285
    Location:7 → 70
    DPM3; Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LEQ4.1

Gene LinkOut

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