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TBL7 TRICHOME BIREFRINGENCE-LIKE 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841310, updated on 18-Sep-2024

Summary

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Official Symbol
TBL7
Official Full Name
TRICHOME BIREFRINGENCE-LIKE 7
Primary source
TAIR:AT1G48880
Locus tag
AT1G48880
See related
Araport:AT1G48880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F27K7.9; F27K7_9; TRICHOME BIREFRINGENCE-LIKE 7
Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
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Genomic context

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See TBL7 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (18080408..18082925)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Signal recognition particle, SRP54 subunit protein Neighboring gene Flavin-containing monooxygenase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103782.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
TRICHOME BIREFRINGENCE-LIKE 7
NP_175319.2
  • TRICHOME BIREFRINGENCE-LIKE 7 (TBL7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1333 Blast hits to 1318 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1329; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18080408..18082925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103782.3 → NP_175319.2  TRICHOME BIREFRINGENCE-LIKE 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175319.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I037, Q9FVP8
    UniProtKB/TrEMBL
    A0A654EGR1
    Conserved Domains (2) summary
    pfam13839
    Location:168 → 441
    PC-Esterase; GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
    pfam14416
    Location:114 → 166
    PMR5N; PMR5 N terminal Domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4I037.1

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