U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ABCG13 ABC-2 type transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841571, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
ABCG13
Official Full Name
ABC-2 type transporter family protein
Primary source
TAIR:AT1G51460
Locus tag
AT1G51460
See related
Araport:AT1G51460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATP-binding cassette G13; F5D21.8; F5D21_8
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ABCG13 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (19076838..19081451, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene TRAUCO Neighboring gene beta glucosidase 35 Neighboring gene disease resistance protein (CC-NBS-LRR class) family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Arabidopsis ABCG13 transporter is required for flower cuticle secretion and patterning of the petal epidermis. Panikashvili D, et al. New Phytol, 2011 Apr. PMID 21232060
  2. The Arabidopsis DESPERADO/AtWBC11 transporter is required for cutin and wax secretion. Panikashvili D, et al. Plant Physiol, 2007 Dec. PMID 17951461, Free PMC Article
  3. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
  4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ABCG13 is required for the transport of flower cuticular lipids.[ABCG13]
    Title: The Arabidopsis ABCG13 transporter is required for flower cuticle secretion and patterning of the petal epidermis.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_104024.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATPase-coupled transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cutin transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within petal epidermis patterning IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in response to salt stress IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ABC-2 type transporter family protein
NP_175557.1
  • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 379847 Blast hits to 348933 proteins in 4101 species: Archae - 6887; Bacteria - 304547; Metazoa - 7636; Fungi - 6582; Plants - 5428; Viruses - 18; Other Eukaryotes - 48749 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19076838..19081451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104024.3 → NP_175557.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175557.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GX48, Q9C8J8
    UniProtKB/TrEMBL
    A0A5S9WNI2, A0A654EMJ7, A0A7G2E1G5
    Conserved Domains (1) summary
    TIGR00955
    Location:27 → 627
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C8J8.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools