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Membrane fusion protein Use1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841850, updated on 18-Sep-2024

Summary

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Official Full Name
Membrane fusion protein Use1
Primary source
TAIR:AT1G54110
Locus tag
AT1G54110
See related
Araport:AT1G54110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15I1.20
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (20199310..20201787)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DUF1677 family protein, putative (DUF1677) Neighboring gene aldehyde dehydrogenase 7B4 Neighboring gene cation calcium exchanger 4 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001333630.1
NM_001333631.1
NM_104288.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Membrane fusion protein Use1
NP_564649.1
  • Membrane fusion protein Use1; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Use1 (InterPro:IPR019150); BEST Arabidopsis thaliana protein match is: Membrane fusion protein Use1 (TAIR:AT3G55600.1); Has 213 Blast hits to 213 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 15; Plants - 83; Viruses - 3; Other Eukaryotes - 9 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20199310..20201787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104288.3 → NP_564649.1  Membrane fusion protein Use1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564649.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WII8, A0A5S9WLQ0, Q8LC16, Q9SYG8
    Conserved Domains (1) summary
    cl22856
    Location:5 → 236
    SNARE; SNARE motif

  2. NM_001333630.1 → NP_001320883.1  Membrane fusion protein Use1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AP59, A0A5S9WLQ0, Q8LC16

  3. NM_001333631.1 → NP_001320884.1  Membrane fusion protein Use1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AP56, A0A5S9WLQ0, Q8LC16
    Conserved Domains (1) summary
    cl22856
    Location:11 → 242
    SNARE; SNARE motif
Nucleotide Protein
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