emp24/gp25L/p24 family/GOLD family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: emp24/gp25L/p24 family/GOLD family protein
Primary source: TAIR:AT1G57620
Locus tag: AT1G57620
See related: Araport:AT1G57620
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: CYB; CYTOPLASMIC BODIES; T8L23.9; T8L23_9
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 4

Sequence:: Chromosome: 1; NC_003070.9 (21342627..21344804)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NUC acts upstream of CYB in the export of GLL23 from the endoplasmic reticulum (ER).
Title: Trafficking of the myrosinase-associated protein GLL23 requires NUC/MVP1/GOLD36/ERMO3 and the p24 protein CYB.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_104559.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within intracellular protein transport	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in intracellular anatomical structure	IMP Inferred from Mutant Phenotype more info	PubMed

General protein information

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Preferred Names: emp24/gp25L/p24 family/GOLD family protein

NP_176075.1

emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G09580.1); Has 1845 Blast hits to 1843 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 849; Fungi - 519; Plants - 275; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

21342627..21344804

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_104559.4 → NP_176075.1 emp24/gp25L/p24 family/GOLD family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_176075.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9FVU0

UniProtKB/TrEMBL

A0A178WJZ9, A0A5S9WQE1, A0A654EKJ6

Conserved Domains (1) summary

pfam01105
Location:25 → 207

EMP24_GP25L; emp24/gp25L/p24 family/GOLD