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S-locus lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842437, updated on 18-Sep-2024

Summary

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Official Full Name
S-locus lectin protein kinase family protein
Primary source
TAIR:AT1G61430
Locus tag
AT1G61430
See related
Araport:AT1G61430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T1F9.8; T1F9_8
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (22664501..22668651, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA double-strand break repair and VJ recombination XRCC4 Neighboring gene CAP-gly domain linker Neighboring gene S-locus lectin protein kinase family protein Neighboring gene ncRNA Neighboring gene S-locus lectin protein kinase family protein Neighboring gene CAP-gly domain linker Neighboring gene G-type lectin S-receptor-like Serine/Threonine-kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001333961.1
NM_001333962.1
NM_001333963.1
NM_001333964.1
NM_001333968.1
NM_001333969.1
NM_001333970.1
NM_001333971.1
NM_001333972.1
NM_104824.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables calmodulin binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in recognition of pollen IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
S-locus lectin protein kinase family protein
NP_176338.1
  • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61440.1); Has 120876 Blast hits to 119144 proteins in 4455 species: Archae - 106; Bacteria - 13737; Metazoa - 44590; Fungi - 9940; Plants - 34648; Viruses - 406; Other Eukaryotes - 17449 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22664501..22668651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333967.1 → NP_001320263.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMA3

  2. NM_001333966.1 → NP_001320261.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMD4

  3. NM_001333965.1 → NP_001320260.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMA7

  4. NM_104824.3 → NP_176338.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176338.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O64777
    UniProtKB/TrEMBL
    A0A654EQ46
    Conserved Domains (7) summary
    smart00108
    Location:30 → 146
    B_lectin; Bulb-type mannose-specific lectin
    smart00221
    Location:490 → 763
    STYKc; Protein kinase; unclassified specificity
    cd00028
    Location:31 → 146
    B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
    pfam11883
    Location:764 → 806
    DUF3403; Domain of unknown function (DUF3403)
    cd14066
    Location:495 → 764
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00954
    Location:205 → 311
    S_locus_glycop; S-locus glycoprotein domain
    pfam08276
    Location:338 → 398
    PAN_2; PAN-like domain

  5. NM_001333968.1 → NP_001320264.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM94, A0A654EQ46

  6. NM_001333961.1 → NP_001320258.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMA0, A0A654EQ46

  7. NM_001333972.1 → NP_001320259.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM91, A0A654EQ46

  8. NM_001333971.1 → NP_001320262.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM95, A0A654EQ46

  9. NM_001333969.1 → NP_001320265.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMA7

  10. NM_001333970.1 → NP_001320266.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM95, A0A654EQ46

  11. NM_001333964.1 → NP_001320256.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM92, A0A654EQ46

  12. NM_001333963.1 → NP_001320255.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM92, A0A654EQ46

  13. NM_001333962.1 → NP_001320257.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM92, A0A654EQ46
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O64777.2

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