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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842502, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G62060
Locus tag
AT1G62060
See related
Araport:AT1G62060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19K23.1; F19K23_1
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (22941569..22942300, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and Characterization of Arabidopsis Seed Coat Mucilage Proteins. Tsai AY, et al. Plant Physiol, 2017 Feb. PMID 28003327, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104887.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mucilage biosynthetic process IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within seed coat development IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_176397.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62220.1); Has 386 Blast hits to 125 proteins in 33 species: Archae - 6; Bacteria - 295; Metazoa - 8; Fungi - 17; Plants - 46; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22941569..22942300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104887.3 → NP_176397.1  uncharacterized protein AT1G62060 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176397.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04573
    UniProtKB/TrEMBL
    A0A654ELP9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O04573.1

Gene LinkOut

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Molecular Biology Databases
Research Materials