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NAD(P)-binding Rossmann-fold superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842644, updated on 18-Sep-2024

Summary

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Official Full Name
NAD(P)-binding Rossmann-fold superfamily protein
Primary source
TAIR:AT1G63380
Locus tag
AT1G63380
See related
Araport:AT1G63380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2K11.24; F2K11_24
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (23505250..23506510)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene ncRNA Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene flavin containing monooxygenase FMO GS-OX-like protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene LURP-one-like protein (DUF567)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001334086.1
NM_001334087.1
NM_001334088.1
NM_105017.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
NAD(P)-binding Rossmann-fold superfamily protein
NP_001319302.1
  • NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Polyketide synthase/Fatty acid synthase, KR (InterPro:IPR020842), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G62610.4).
NP_176527.4
  • NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, non-phosphorylated glucose catabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Polyketide synthase/Fatty acid synthase, KR (InterPro:IPR020842), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G62610.4); Has 129510 Blast hits to 129297 proteins in 3717 species: Archae - 1029; Bacteria - 82855; Metazoa - 7624; Fungi - 6981; Plants - 3338; Viruses - 2; Other Eukaryotes - 27681 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23505250..23506510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334086.1 → NP_001319302.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W287, F4I228, Q9SH24
    Conserved Domains (2) summary
    cd05233
    Location:27 → 271
    SDR_c; classical (c) SDRs
    PRK05653
    Location:22 → 276
    fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

  2. NM_001334087.1 → NP_001320557.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WM65, A0A1P8AN93, A0A5S9WS22

  3. NM_001334088.1 → NP_001320558.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WM65, A0A1P8AN69, A0A5S9WS22

  4. NM_105017.4 → NP_176527.4  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176527.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W287, F4I227
    Conserved Domains (2) summary
    cd05233
    Location:22 → 266
    SDR_c; classical (c) SDRs
    PRK05653
    Location:17 → 271
    fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Nucleotide Protein
Heading Accession and Version

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