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Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842816, updated on 18-Sep-2024

Summary

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Official Full Name
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
Primary source
TAIR:AT1G65080
Locus tag
AT1G65080
See related
Araport:AT1G65080
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16G16.8; F16G16_8
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (24176563..24180871)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene 4-coumarate:CoA ligase 3 Neighboring gene DNA mismatch repair protein MutS, type 2 Neighboring gene nucleolin Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein Neighboring gene SCR-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The OXA2a Insertase of Arabidopsis Is Required for Cytochrome c Maturation. Kolli R, et al. Plant Physiol, 2020 Oct. PMID 32759271, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_105182.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables membrane insertase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial cytochrome c oxidase assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
NP_176688.3
  • Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT3G44370.1); Has 1367 Blast hits to 1362 proteins in 525 species: Archae - 4; Bacteria - 825; Metazoa - 205; Fungi - 148; Plants - 104; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24176563..24180871
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105182.5 → NP_176688.3  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176688.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L718, Q9SS52
    UniProtKB/TrEMBL
    A0A178W6U1
    Conserved Domains (3) summary
    sd00006
    Location:346 → 374
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:346 → 408
    TPR_11; TPR repeat
    cl00489
    Location:86 → 301
    60KD_IMP; 60Kd inner membrane protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L718.2

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