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DNAJ heat shock N-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842835, updated on 18-Sep-2024

Summary

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Official Full Name
DNAJ heat shock N-terminal domain-containing protein
Primary source
TAIR:AT1G65280
Locus tag
AT1G65280
See related
Araport:AT1G65280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8F5.5; T8F5_5
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (24245122..24248762)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene plastid transcriptionally active 4 Neighboring gene ER membrane protein complex subunit-like protein Neighboring gene mitochondrial acyl carrier protein 2 Neighboring gene ubiquitin carboxyl-terminal hydrolase Neighboring gene AGAMOUS-like 38

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_105201.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DNAJ heat shock N-terminal domain-containing protein
NP_176707.3
  • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Protein of unknown function DUF3752 (InterPro:IPR022226); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G22080.2); Has 26180 Blast hits to 20391 proteins in 2424 species: Archae - 138; Bacteria - 5225; Metazoa - 9539; Fungi - 2558; Plants - 2202; Viruses - 36; Other Eukaryotes - 6482 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24245122..24248762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334200.1 → NP_001323409.1  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O80799, Q0WVU7

  2. NM_105201.5 → NP_176707.3  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176707.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    O80799, Q0WVU7
    Conserved Domains (2) summary
    pfam00226
    Location:305 → 366
    DnaJ; DnaJ domain
    pfam12572
    Location:435 → 579
    DUF3752; Protein of unknown function (DUF3752)
Nucleotide Protein
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