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plant/protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842902, updated on 18-Sep-2024

Summary

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Official Full Name
plant/protein
Primary source
TAIR:AT1G65900
Locus tag
AT1G65900
See related
Araport:AT1G65900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12P19.7; F12P19_7
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (24515758..24518601, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene benzoyloxyglucosinolate 1 Neighboring gene acyl activating enzyme 12 Neighboring gene NAC domain containing protein 28 Neighboring gene Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001334225.1
NM_105262.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
plant/protein
NP_564864.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24515758..24518601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105262.4 → NP_564864.1  plant/protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564864.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WB23, A0A654ELC7, Q94A98
    Conserved Domains (2) summary
    COG0614
    Location:172 → 366
    FepB; ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]
    cl00262
    Location:179 → 265
    TroA-like; Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between ...

  2. NM_001334225.1 → NP_001320413.1  plant/protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AMT8, Q8LDG8
Nucleotide Protein
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