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Terpenoid cyclases/Protein prenyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842915, updated on 18-Sep-2024

Summary

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Official Full Name
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Primary source
TAIR:AT1G66020
Locus tag
AT1G66020
See related
Araport:AT1G66020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15E12.3; F15E12_3
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (24577544..24580185)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene cytochrome P450, family 96, subfamily A, polypeptide 14 pseudogene Neighboring gene Zinc finger (C3HC4-type RING finger) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a Dolabellane Type Diterpene Synthase and other Root-Expressed Diterpene Synthases in Arabidopsis. Wang Q, et al. Front Plant Sci, 2016. PMID 27933080, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_105273.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables terpene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables terpene synthase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in diterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in terpenoid biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Terpenoid cyclases/Protein prenyltransferases superfamily protein
NP_176776.1
  • Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 1629 Blast hits to 1603 proteins in 178 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 1621; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24577544..24580185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334232.1 → NP_001321005.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8APJ6

  2. NM_105273.3 → NP_176776.1  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176776.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C8E3
    UniProtKB/TrEMBL
    A0A178W206, A0A5S9WS77
    Conserved Domains (1) summary
    cd00684
    Location:56 → 595
    Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C8E3.1

Gene LinkOut

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