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catalytics [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843818, updated on 18-Sep-2024

Summary

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Official Full Name
catalytics
Primary source
TAIR:AT1G74790
Locus tag
AT1G74790
See related
Araport:AT1G74790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F25A4.24; F25A4_24
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (28098464..28101896)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene zinc ion binding protein Neighboring gene Nodulin-like / Major Facilitator Superfamily protein Neighboring gene Galactosyltransferase family protein Neighboring gene HCO3- transporter family Neighboring gene RmlC-like cupins superfamily protein Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glycosylphosphatidylinositol-anchored cell-surface proteins from Arabidopsis. Sherrier DJ, et al. Electrophoresis, 1999 Jul. PMID 10451111
  2. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
  3. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
  4. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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NM_106137.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in membrane TAS
Traceable Author Statement
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
catalytics
NP_177617.2
  • catalytics; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: hipl2 protein precursor (TAIR:AT5G62630.1); Has 3691 Blast hits to 3691 proteins in 820 species: Archae - 60; Bacteria - 1937; Metazoa - 139; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28098464..28101896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106137.5 → NP_177617.2  catalytics [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177617.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSG3
    UniProtKB/TrEMBL
    A0A178WMH4
    Conserved Domains (1) summary
    cl26817
    Location:214 → 509
    GSDH; Glucose / Sorbosone dehydrogenase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SSG3.2

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