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BOR5 HCO3- transporter family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843820, updated on 18-Sep-2024

Summary

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Official Symbol
BOR5
Official Full Name
HCO3- transporter family
Primary source
TAIR:AT1G74810
Locus tag
AT1G74810
See related
Araport:AT1G74810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9E10.34; F9E10_34; REQUIRES HIGH BORON 5
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Genomic context

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See BOR5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Sequence:
Chromosome: 1; NC_003070.9 (28107822..28111940)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nodulin-like / Major Facilitator Superfamily protein Neighboring gene catalytics Neighboring gene Galactosyltransferase family protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593) Neighboring gene Homeodomain-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables solute:inorganic anion antiporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
HCO3- transporter family
NP_001319383.1
  • BOR5; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G15460.1); Has 2579 Blast hits to 1402 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1942; Fungi - 299; Plants - 229; Viruses - 2; Other Eukaryotes - 103 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28107822..28111940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334668.1 → NP_001322361.1  HCO3- transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ATS9

  2. NM_001334669.1 → NP_001322362.1  HCO3- transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ATS7, A0A5S9WUE3

  3. NM_106139.3 → NP_177619.2  HCO3- transporter family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177619.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9P1, Q9SSG5
    UniProtKB/TrEMBL
    A0A178WFC4, A0A5S9WUE3
    Conserved Domains (1) summary
    cl23746
    Location:6 → 555
    Xan_ur_permease; Permease family

  4. NM_001334670.1 → NP_001322363.1  HCO3- transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ATR0, A0A5S9WUE3, A0A654EZQ8
    Conserved Domains (1) summary
    cl26877
    Location:20 → 507
    Band_3_cyto; Band 3 cytoplasmic domain

  5. NM_001334671.1 → NP_001322364.1  HCO3- transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ATS7, A0A5S9WUE3

  6. NM_001334672.1 → NP_001322360.1  HCO3- transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9P1, Q9SSG5
    UniProtKB/TrEMBL
    A0A178WFC4, A0A5S9WUE3
    Conserved Domains (1) summary
    cl23746
    Location:6 → 555
    Xan_ur_permease; Permease family

  7. NM_001334667.1 → NP_001319383.1  HCO3- transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9P1, Q9SSG5
    UniProtKB/TrEMBL
    A0A178WFC4, A0A5S9WUE3
    Conserved Domains (1) summary
    cl23746
    Location:6 → 555
    Xan_ur_permease; Permease family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SSG5.1

Gene LinkOut

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