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Auxin efflux carrier family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843985, updated on 18-Sep-2024

Summary

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Official Full Name
Auxin efflux carrier family protein
Primary source
TAIR:AT1G76520
Locus tag
AT1G76520
See related
Araport:AT1G76520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14G6.12; F14G6_12; PILS3; PIN-LIKES 3
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (28714765..28717910)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Putative AT-hook DNA-binding family protein Neighboring gene ARID/BRIGHT DNA-binding domain-containing protein Neighboring gene Auxin efflux carrier family protein Neighboring gene cyclin-dependent kinase B2;1 Neighboring gene Phosphofructokinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Endoplasmic reticulum stress controls PIN-LIKES abundance and thereby growth adaptation. Waidmann S, et al. Proc Natl Acad Sci U S A, 2023 Aug. PMID 37487064, Free PMC Article
  2. A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Barbez E, et al. Nature, 2012 Apr 15. PMID 22504182
  3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
  4. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
  5. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PILS3 is a member of the PIN-LIKES (PILS) protein family of putative auxin carriers residing at the endoplasmic reticulum.
    Title: A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_106302.5
NM_179561.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum to cytosol auxin transport IEA
Inferred from Electronic Annotation
more info
  
involved_in response to auxin IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to salt stress IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
Auxin efflux carrier family protein
NP_565133.1
  • Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76530.1); Has 676 Blast hits to 645 proteins in 140 species: Archae - 2; Bacteria - 51; Metazoa - 0; Fungi - 244; Plants - 324; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
NP_849892.1
  • Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76530.1); Has 676 Blast hits to 645 proteins in 140 species: Archae - 2; Bacteria - 51; Metazoa - 0; Fungi - 244; Plants - 324; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28714765..28717910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179561.4 → NP_849892.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849892.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0Z2W2, Q9C9K5
    UniProtKB/TrEMBL
    A0A178W0X0, A0A5S9WUW4, Q8LER0
    Conserved Domains (1) summary
    pfam03547
    Location:10 → 382
    Mem_trans; Membrane transport protein

  2. NM_106302.5 → NP_565133.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565133.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0Z2W2, Q9C9K5
    UniProtKB/TrEMBL
    A0A178W0X0, A0A5S9WUW4, Q8LER0
    Conserved Domains (1) summary
    pfam03547
    Location:10 → 382
    Mem_trans; Membrane transport protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C9K5.1

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