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PPK1 putative protein kinase 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844108, updated on 18-Sep-2024

Summary

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Official Symbol
PPK1
Official Full Name
putative protein kinase 1
Primary source
TAIR:AT1G77720
Locus tag
AT1G77720
See related
Araport:AT1G77720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
putative protein kinase 1; T32E8.5; T32E8_5
Summary
Encodes a predicted protein kinase based on sequence similarity.
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Genomic context

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See PPK1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (29210496..29214135)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene Pleckstrin homology (PH) domain superfamily protein Neighboring gene phosphatidylinositol-4-phosphate 5-kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PPKs mediate direct signal transfer from phytochrome photoreceptors to transcription factor PIF3. Ni W, et al. Nat Commun, 2017 May 11. PMID 28492231, Free PMC Article
  2. Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. Nemoto K, et al. Phytochemistry, 2011 Jul. PMID 21477822
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_106421.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables MAP kinase kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity HDA PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein autophosphorylation HDA PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
putative protein kinase 1
NP_565160.3
  • putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29210496..29214135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106421.5 → NP_565160.3  putative protein kinase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565160.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84VX4, Q8LA38, Q9CA22
    UniProtKB/TrEMBL
    A0A178W4E7, A0A7G2E9M8
    Conserved Domains (1) summary
    cd14131
    Location:398 → 693
    PKc_Mps1; Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84VX4.1

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