U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RING/U-box superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844118, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
RING/U-box superfamily protein
Primary source
TAIR:AT1G77830
Locus tag
AT1G77830
See related
Araport:AT1G77830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32E8.18
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (29267160..29267752, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ribonuclease H superfamily polynucleotidyl transferase Neighboring gene pseudo Neighboring gene Translation initiation factor IF2/IF5 Neighboring gene auxin response factor 17

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
RING/U-box superfamily protein
NP_177906.1
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); Has 680 Blast hits to 679 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 16; Plants - 379; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29267160..29267752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106432.1 → NP_177906.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177906.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9SH17
    Conserved Domains (1) summary
    pfam13639
    Location:127 → 170
    zf-RING_2; Ring finger domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools