U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

transferases, transferring glycosyl groups [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844163, updated on 18-Sep-2024

Summary

Official Full Name
transferases, transferring glycosyl groups
Primary source
TAIR:AT1G78280
Locus tag
AT1G78280
See related
Araport:AT1G78280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3F9.18; F3F9_18
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
16
Sequence:
Chromosome: 1; NC_003070.9 (29452555..29457373)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene UDP-glucosyl transferase 85A4 Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene general regulatory factor 2

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_106477.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
transferases, transferring glycosyl groups
NP_177951.6
  • transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29452555..29457373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106477.7NP_177951.6  transferases, transferring glycosyl groups [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177951.6

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M9E8
    UniProtKB/TrEMBL
    A0A178WKI0, A0A5S9WVF0, A0A654EQ23
    Conserved Domains (3) summary
    pfam01636
    Location:669877
    APH; Phosphotransferase enzyme family
    pfam12937
    Location:1761
    F-box-like
    cl40423
    Location:137362
    cupin_RmlC-like; RmlC-like cupin superfamily