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SOUL heme-binding family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844181, updated on 18-Sep-2024

Summary

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Official Full Name
SOUL heme-binding family protein
Primary source
TAIR:AT1G78450
Locus tag
AT1G78450
See related
Araport:AT1G78450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3F9.4
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (29516989..29518028, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ROP interactive partner 2 Neighboring gene gibberellin 2-beta-dioxygenase Neighboring gene SOUL heme-binding family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_106492.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SOUL heme-binding family protein
NP_565181.1
  • SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G17100.1); Has 640 Blast hits to 629 proteins in 68 species: Archae - 2; Bacteria - 20; Metazoa - 147; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29516989..29518028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106492.3 → NP_565181.1  SOUL heme-binding family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565181.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WVF6, A0A654EQ29, Q9SYN6
    Conserved Domains (1) summary
    pfam04832
    Location:35 → 211
    SOUL; SOUL heme-binding protein
Nucleotide Protein
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