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RDS1 Rds1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 850470, updated on 9-Dec-2024

Summary

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Official Symbol
RDS1
Official Full Name
Rds1p
Primary source
SGD:S000000703
Locus tag
YCR106W
See related
AllianceGenome:SGD:S000000703; FungiDB:YCR106W; VEuPathDB:YCR106W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables sequence-specific DNA binding activity. Involved in response to xenobiotic stimulus. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See RDS1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_001135.5 (310958..313456)

Chromosome III - NC_001135.5Genomic Context describing neighboring genes Neighboring gene seripauperin PAU3 Neighboring gene NADP-dependent alcohol dehydrogenase Neighboring gene putative aryl-alcohol dehydrogenase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001135.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptional regulatory code of a eukaryotic genome. Harbison CT, et al. Nature, 2004 Sep 2. PMID 15343339, Free PMC Article
  2. New regulators of drug sensitivity in the family of yeast zinc cluster proteins. Akache B, et al. J Biol Chem, 2002 Jun 14. PMID 11943786
  3. Phenotypic analysis of genes encoding yeast zinc cluster proteins. Akache B, et al. Nucleic Acids Res, 2001 May 15. PMID 11353088, Free PMC Article
  4. A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Badis G, et al. Mol Cell, 2008 Dec 26. PMID 19111667, Free PMC Article
  5. The chaperone-binding activity of the mitochondrial surface receptor Tom70 protects the cytosol against mitoprotein-induced stress. Backes S, et al. Cell Rep, 2021 Apr 6. PMID 33826901, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables sequence-specific DNA binding HDA PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in response to xenobiotic stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Rds1p
NP_010031.1
  • Putative zinc cluster transcription factor; involved in conferring resistance to cycloheximide

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001135.5 Reference assembly

    Range
    310958..313456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178813.1 → NP_010031.1  TPA: Rds1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010031.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VRA6, P25611
    UniProtKB/TrEMBL
    C8ZAZ4
    Conserved Domains (2) summary
    cd12148
    Location:221 → 473
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    pfam00172
    Location:14 → 51
    Zn_clus; Fungal Zn(2)-Cys(6) binuclear cluster domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P25611.1

Gene LinkOut

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