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RPS25B ribosomal 40S subunit protein S25B [ Saccharomyces cerevisiae S288C ]

Gene ID: 851045, updated on 9-Dec-2024

Summary

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Official Symbol
RPS25B
Official Full Name
ribosomal 40S subunit protein S25B
Primary source
SGD:S000004325
Locus tag
YLR333C
See related
AllianceGenome:SGD:S000004325; FungiDB:YLR333C; VEuPathDB:YLR333C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Part of cytosolic small ribosomal subunit. Orthologous to human RPS25 (ribosomal protein S25). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See RPS25B in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (795573..795899, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Glu Neighboring gene nucleoporin NUP2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The gene for yeast ribosomal protein S31 contains an intron in the leader sequence. Nieuwint RT, et al. Curr Genet, 1985. PMID 2856436
  2. Binding of a viral IRES to the 40S subunit occurs in two successive steps mediated by eS25. Walters B, et al. Nucleic Acids Res, 2020 Aug 20. PMID 32609821, Free PMC Article
  3. RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs. Landry DM, et al. Genes Dev, 2009 Dec 1. PMID 19952110, Free PMC Article
  4. Identification of protein N-terminal methyltransferases in yeast and humans. Webb KJ, et al. Biochemistry, 2010 Jun 29. PMID 20481588, Free PMC Article
  5. The Ccr4-Not complex monitors the translating ribosome for codon optimality. Buschauer R, et al. Science, 2020 Apr 17. PMID 32299921, Free PMC Article

See all (52) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Binding of a viral IRES to the 40S subunit occurs in two successive steps mediated by eS25.
    Title: Binding of a viral IRES to the 40S subunit occurs in two successive steps mediated by eS25.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal 40S subunit protein S25B
NP_013437.1
  • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    795573..795899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182222.1 → NP_013437.1  TPA: ribosomal 40S subunit protein S25B [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013437.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A2TBM7, D6VYX4, P05758, P07282, P0C0T4
    UniProtKB/TrEMBL
    A7A1L5, B3RHK7, C7GUA3, C8ZDU4, G2WJF3, N1NYM5
    Conserved Domains (1) summary
    COG4901
    Location:1 → 107
    RPS25; Ribosomal protein S25 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C0T4.1

Gene LinkOut

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