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GID12 Gid12p [ Saccharomyces cerevisiae S288C ]

Gene ID: 851378, updated on 4-Jan-2025

Summary

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Official Symbol
GID12
Official Full Name
Gid12p
Primary source
SGD:S000002335
Locus tag
YDL176W
See related
AllianceGenome:SGD:S000002335; FungiDB:YDL176W; VEuPathDB:YDL176W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
IPF1
Summary
Involved in actin cortical patch assembly. Acts upstream of or within regulation of protein-containing complex assembly. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See GID12 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (142097..144223)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene D-lactate dehydrogenase Neighboring gene uncharacterized protein Neighboring gene TRAMP complex RNA-binding subunit Neighboring gene D-lactate dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001136.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic genetics and single-cell imaging reveal widespread morphological pleiotropy and cell-to-cell variability. Mattiazzi Usaj M, et al. Mol Syst Biol, 2020 Feb. PMID 32064787, Free PMC Article
  2. From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions. Ulitsky I, et al. Mol Syst Biol, 2008. PMID 18628749, Free PMC Article
  3. Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation. Qiao S, et al. Nat Commun, 2022 Jun 1. PMID 35650207, Free PMC Article
  4. PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs. Pitre S, et al. BMC Bioinformatics, 2006 Jul 27. PMID 16872538, Free PMC Article
  5. Bayesian Markov Random Field analysis for protein function prediction based on network data. Kourmpetis YA, et al. PLoS One, 2010 Feb 24. PMID 20195360, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in actin cortical patch assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of protein-containing complex assembly IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Gid12p
NP_010105.1
  • hypothetical protein involved in regulating assembly of Gid4p into the GID E3 ligase complex; interacts with GID complex components; involved in actin patch formation; computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    142097..144223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180236.1 → NP_010105.1  TPA: Gid12p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010105.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VRH6, Q12027
    UniProtKB/TrEMBL
    A6ZXF5, B3LH60, B5VF96, C7GL22, C8Z6C8, G2WBY9, N1P8Y3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q12027.1

Gene LinkOut

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