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SNA4 Sna4p [ Saccharomyces cerevisiae S288C ]

Gene ID: 851434, updated on 4-Jan-2025

Summary

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Official Symbol
SNA4
Official Full Name
Sna4p
Primary source
SGD:S000002281
Locus tag
YDL123W
See related
AllianceGenome:SGD:S000002281; FungiDB:YDL123W; VEuPathDB:YDL123W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in fungal-type vacuole lumen and fungal-type vacuole membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See SNA4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (241418..241840)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene adenosine 5'-monophosphoramidase Neighboring gene aldo-keto reductase superfamily protein Neighboring gene ubiquitin-specific protease UBP1 Neighboring gene Exp1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001136.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual sorting of the Saccharomyces cerevisiae vacuolar protein Sna4p. Pokrzywa W, et al. Eukaryot Cell, 2009 Mar. PMID 19168755, Free PMC Article
  2. Incorporating functional inter-relationships into protein function prediction algorithms. Pandey G, et al. BMC Bioinformatics, 2009 May 12. PMID 19435516, Free PMC Article
  3. Sorting of proteins into multivesicular bodies: ubiquitin-dependent and -independent targeting. Reggiori F, et al. EMBO J, 2001 Sep 17. PMID 11566881, Free PMC Article
  4. ESCRT machinery plays a role in microautophagy in yeast. Morshed S, et al. BMC Mol Cell Biol, 2020 Oct 7. PMID 33028189, Free PMC Article
  5. Selective Lysosomal Transporter Degradation by Organelle Membrane Fusion. McNally EK, et al. Dev Cell, 2017 Jan 23. PMID 28017618

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Two motifs allows Sna4p to localize to both the vacuolar membrane and the lumen.
    Title: Dual sorting of the Saccharomyces cerevisiae vacuolar protein Sna4p.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in fungal-type vacuole lumen IDA
Inferred from Direct Assay
more info
 PubMed 
located_in fungal-type vacuole lumen IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in fungal-type vacuole membrane HDA PubMed 
located_in fungal-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in fungal-type vacuole membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Sna4p
NP_010160.1
  • hypothetical protein; localized to the vacuolar outer membrane; predicted to be palmitoylated

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    241418..241840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180182.1 → NP_010160.1  TPA: Sna4p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010160.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VRM7, Q07549
    UniProtKB/TrEMBL
    A6ZXK6, B3LH13, C7GJJ3, C8Z6I0, G2WC39, N1P407
    Conserved Domains (1) summary
    COG0401
    Location:8 → 63
    YqaE; Uncharacterized membrane protein YqaE, homolog of Blt101, UPF0057 family [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q07549.1

Gene LinkOut

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