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ECM13 Ecm13p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852237, updated on 9-Dec-2024

Summary

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Official Symbol
ECM13
Official Full Name
Ecm13p
Primary source
SGD:S000000139
Locus tag
YBL043W
See related
AllianceGenome:SGD:S000000139; FungiDB:YBL043W; VEuPathDB:YBL043W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be involved in cell wall organization. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See ECM13 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (136688..137461)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene ubiquinol--cytochrome-c reductase subunit COR1 Neighboring gene uncharacterized protein Neighboring gene uridine permease Neighboring gene proteasome core particle subunit beta 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Construction and genetic analysis of S. cerevisiae deletants of six novel ORFs from chromosome II. Malagón F, et al. Yeast, 1999 Jul. PMID 10407275
  2. Exploring whole-genome duplicate gene retention with complex genetic interaction analysis. Kuzmin E, et al. Science, 2020 Jun 26. PMID 32586993, Free PMC Article
  3. Tunicamycin Sensitivity-Suppression by High Gene Dosage Reveals New Functions of the Yeast Hog1 MAP Kinase. Hernández-Elvira M, et al. Cells, 2019 Jul 12. PMID 31336877, Free PMC Article
  4. Specific transcriptional responses induced by 8-methoxypsoralen and UVA in yeast. Dardalhon M, et al. FEMS Yeast Res, 2007 Sep. PMID 17608707, Free PMC Article
  5. Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Lussier M, et al. Genetics, 1997 Oct. PMID 9335584, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Ecm13p
NP_009510.1
  • Non-essential hypothetical protein; induced by treatment with 8-methoxypsoralen and UVA irradiation; ECM13 has a paralog, YJR115W, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    136688..137461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178283.1 → NP_009510.1  TPA: Ecm13p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009510.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VPV5, P38195
    UniProtKB/TrEMBL
    A6ZKQ3, B3LNI2, C7GNB9, C8Z3Q4, G2W8W4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38195.1

Gene LinkOut

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